Hpc-syspros-basics.github.io
Installing NHC · HPC Basics
WEBExecuting the make test step in the previous example is optional but recommended as this will run NHC’s built-in unit test suite to make sure everything is functioning properly.
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URL: https://hpc-syspros-basics.github.io/HPC_Basics_menu/Node_Health_Check/Installing_NHC.html
Configuring NHC · HPC Basics
WEBThe starting configuration is meant to highlight the range of checks that you could have NHC check to ensure a node is healthy before it will run jobs. When configuring your nhc.conf file you should keep in mind that checks are executed from the top of the file down. Therefore you may want to place the checks that you care about most at the top
Standalone Running NHC · HPC Basics
WEBThere is also value in running NHC as a standalone process to pick up any misconfiguration or missing components for instance when you are checking on a node after hardware repairs or checking all nodes in a cluster following a maintenance period. To run NHC as a standalone process to check a node's health you can just run the binary from /usr
Scheduler Integration · HPC Basics
WEBSlurm Integration. Add the following to /etc/slurm.slurm.conf (or wherever your slurm.conf file is located in your environment) on your controller node (s) AND your compute nodes (because, even though the HealthCheckProgram only runs on the nodes, your slurm.conf file must be the same across your entire system): This will execute NHC every 300
HPC Basics · Documentation home for HPC Basics instruction
WEBWe speak directly to the state of the practice of standing up and operating high performance systems with an emphasis on solutions that can be implemented by systems staff at other institutions. HPC Basics by SIGHPCSYSPROS Topics Introduction to HPC Designing a cluster Introduction to HPC Storage Parallel Filesystems Cluster Stack Basics Pr
Benchmarking · HPC Basics
WEBBenchmarking. Benchmarking is the practice of running tests on your hardware to verify performance and in some cases stress the hardware to ensure that the hardware is capable of sustained workloads. When we talk about gathering performance numbers or ensuring that the performance of a node is within an acceptable range we use the term benchmark.
Reference Materials · HPC Basics
WEBReference Materials. Here you will find a collection of reference material that were either used to pull information from to fill in the topics covered on the website, or meant as additional supplemental resources to consult for further information on topics.
Reference Books · HPC Basics
WEBReference Books High Performance Computing: Modern Systems and Practices. High Performance Computing: Modern Systems and Practices is a fully comprehensive and easily accessible treatment of high performance computing, covering fundamental concepts and essential knowledge while also providing key skills training. With this book, domain …
Style Guide · HPC Basics
WEBStyle Guide. When writing new documentation please try to follow the style guide for adding in new content. If you don't follow the guide it will cause a delay in how quickly the content is pulled into the documentation as editors will need to adjust or correct the content.
GPU Benchmarks · HPC Basics
WEBgpu-burn. While we have this in the benchmarks section, it is hardly a benchmark, though it does output Floating point operations per second readouts. This piece of code can be used to stress the GPU processors you have in a node and ensure that the GPU can run optimately at fully utilized workloads. The code will easily push the GPU so that it
Audience · HPC Basics
WEBPrerequisites. In order for much of the documentation to make sense we encourage folks to have a basic knowledge of a few concepts in order to get the most out of our documentation. Audience When writing documentation for hpc-syspros-basics you should keep in mind the intended audience for this documentation.
CPU Benchmarks · HPC Basics
WEBThe High Performance Linpack benchmark is the oldest and most widely accepted benchmark that measures the double precision floating point performance of distributed memory clusters. The benchmark is the standard for benchmarking the collective CPU performance of an entire system and is used as the primary means of measurement for …
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